Up scripts

boost/install.sh

@@ -2,11 +2,11 @@
 
 set -x 
 LIB_NAME="boost"
-LIB_VERSION=1.63.0
-LIB_VERSION_DOWNLOAD=1_63_0
+LIB_VERSION=1.65.0
+LIB_VERSION_DOWNLOAD=1_65_0
 GCC_VERSION=6.4.0
 MPI_LIB=openmpi
-MPI_VERSION=2.1.1 #1.10.7
+MPI_VERSION=1.10.7 #2.1.1
 
 LIB_FULLNAME=${LIB_NAME}-${LIB_VERSION}
 GCC_FULL=gcc-$GCC_VERSION

fmilib/module.tmpl

@@ -19,8 +19,10 @@ prepend-path PATH $prefix/bin
 prepend-path LD_LIBRARY_PATH $prefix/lib
 prepend-path MANPATH $prefix/share/man
 
+
 unsetenv LANGUAGE
 unsetenv LANG
 unsetenv LC
 
 setenv FMILIB_DIR $prefix
+setenv FMIL_HOME $prefix

petsc/install.sh

@@ -5,7 +5,7 @@ LIB_NAME="petsc"
 LIB_VERSION=3.7.6
 GCC_VERSION=6.4.0
 MPI_LIB=openmpi
-MPI_VERSION=2.1.1 #1.10.7
+MPI_VERSION=1.10.7 #2.1.1 #1.10.7
 
 LIB_FULLNAME=${LIB_NAME}-${LIB_VERSION}
 GCC_FULL=gcc-$GCC_VERSION

pyfmi/install.sh

+#!/bin/bash
+set -x
+
+################################################################################
+# GENERIC: Base directory for source, install, build.
+SOURCE_BASE_DIR=/data/software/sources
+BUILD_BASE_DIR=/data/software/sources
+INSTALL_BASE_DIR=/data/software/install
+MODULE_BASE_DIR=/data/software/modules
+################################################################################
+SCRIPT_DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"
+
+LIB_NAME="pyfmi"
+LIB_VERSION=2.4.0
+PYTHON3_VERSION=3.0.0
+PYTHON2_VERSION=2.7.0
+FMILIB_VERSION=2.0.3
+GCC_VERSION=6.4.0
+#GMSH_VERSION=2.16.0
+
+LIB_VERSION_MAJOR=`echo "${LIB_VERSION}" | sed 's/\([0-9]\)[.][0-9][.][0-9]/\1/g'`
+LIB_VERSION_MINOR=`echo "${LIB_VERSION}" | sed 's/[0-9][.]\([0-9]\)[.][0-9]/\1/g'`
+LIB_VERSION_PATCH=`echo "${LIB_VERSION}" | sed 's/[0-9][.][0-9][.]\([0-9]\)/\1/g'`
+PYTHON3_VERSION_MAJOR=`echo "${PYTHON3_VERSION}" | sed 's/\([0-9]\)[.][0-9][.][0-9]/\1/g'`
+PYTHON3_VERSION_MINOR=`echo "${PYTHON3_VERSION}" | sed 's/[0-9][.]\([0-9]\)[.][0-9]/\1/g'`
+PYTHON3_VERSION_PATCH=`echo "${PYTHON3_VERSION}" | sed 's/[0-9][.][0-9][.]\([0-9]\)/\1/g'`
+PYTHON2_VERSION_MAJOR=`echo "${PYTHON2_VERSION}" | sed 's/\([0-9]\)[.][0-9][.][0-9]/\1/g'`
+PYTHON2_VERSION_MINOR=`echo "${PYTHON2_VERSION}" | sed 's/[0-9][.]\([0-9]\)[.][0-9]/\1/g'`
+PYTHON2_VERSION_PATCH=`echo "${PYTHON2_VERSION}" | sed 's/[0-9][.][0-9][.]\([0-9]\)/\1/g'`
+FMILIB_VERSION_MAJOR=`echo "${FMILIB_VERSION}" | sed 's/\([0-9]\)[.][0-9][.][0-9]/\1/g'`
+FMILIB_VERSION_MINOR=`echo "${FMILIB_VERSION}" | sed 's/[0-9][.]\([0-9]\)[.][0-9]/\1/g'`
+FMILIB_VERSION_PATCH=`echo "${FMILIB_VERSION}" | sed 's/[0-9][.][0-9][.]\([0-9]\)/\1/g'`
+GCC_VERSION_MAJOR=`echo "${GCC_VERSION}" | sed 's/\([0-9]\)[.][0-9][.][0-9]/\1/g'`
+GCC_VERSION_MINOR=`echo "${GCC_VERSION}" | sed 's/[0-9][.]\([0-9]\)[.][0-9]/\1/g'`
+GCC_VERSION_PATCH=`echo "${GCC_VERSION}" | sed 's/[0-9][.][0-9][.]\([0-9]\)/\1/g'`
+
+DEPEND_PYTHON3=python-${PYTHON3_VERSION_MAJOR}
+DEPEND_MODULE_PYTHON3=python${PYTHON3_VERSION_MAJOR}
+DEPEND_PYTHON2=python-${PYTHON2_VERSION_MAJOR}
+DEPEND_MODULE_PYTHON2=python${PYTHON2_VERSION_MAJOR}
+DEPEND_FMILIB=fmilib-${FMILIB_VERSION}
+DEPEND_MODULE_FMILIB=fmilib${FMILIB_VERSION_MAJOR}${FMILIB_VERSION_MINOR}${FMILIB_VERSION_PATCH}_gcc${GCC_VERSION_MAJOR}${GCC_VERSION_MINOR}${GCC_VERSION_PATCH}
+#DEPEND_GMSH=gmsh-${GMSH_VERSION}
+#DEPEND_MODULE_GMSH=gmsh-${PYTHON_VERSION_MAJOR}
+
+PYTHON2_SOURCE_DIR=${SOURCE_BASE_DIR}/${LIB_NAME}/${LIB_VERSION}/${DEPEND_PYTHON2}/${DEPEND_FMILIB}
+#PYTHON2_BUILD_DIR=${BUILD_BASE_DIR}/${LIB_NAME}/${LIB_VERSION}/${DEPEND_PYTHON2}/build
+PYTHON2_INSTALL_DIR=${INSTALL_BASE_DIR}/${LIB_NAME}/${LIB_VERSION}/${DEPEND_PYTHON2}/${DEPEND_FMILIB}
+PYTHON3_SOURCE_DIR=${SOURCE_BASE_DIR}/${LIB_NAME}/${LIB_VERSION}/${DEPEND_PYTHON3}/${DEPEND_FMILIB}
+#PYTHON3_BUILD_DIR=${BUILD_BASE_DIR}/${LIB_NAME}/${LIB_VERSION}/${DEPEND_PYTHON3}/build
+PYTHON3_INSTALL_DIR=${INSTALL_BASE_DIR}/${LIB_NAME}/${LIB_VERSION}/${DEPEND_PYTHON3}/${DEPEND_FMILIB}
+
+MODULE_DIR=${MODULE_BASE_DIR}/libs/${LIB_NAME}
+PYTHON2_MODULE_PATH=${MODULE_DIR}/${LIB_VERSION}_${DEPEND_MODULE_PYTHON2}_${DEPEND_MODULE_FMILIB}
+PYTHON3_MODULE_PATH=${MODULE_DIR}/${LIB_VERSION}_${DEPEND_MODULE_PYTHON3}_${DEPEND_MODULE_FMILIB}
+
+install_lib()
+{
+FILE_TO_SOURCE=/etc/profile.d/modules.sh
+if [[ -f "${FILE_TO_SOURCE}" ]]; then
+    source ${FILE_TO_SOURCE}
+else
+    echo "File to source (${FILE_TO_SOURCE}) does not exist"
+fi
+    module purge
+    module load gcc/${GCC_VERSION}
+    module load fmilib/${FMILIB_VERSION}_gcc${GCC_VERSION_MAJOR}${GCC_VERSION_MINOR}${GCC_VERSION_PATCH}
+    module list
+
+    pip3 install \
+    --upgrade \
+    --force-reinstall \
+    --src ${PYTHON3_SOURCE_DIR} \
+    --target ${PYTHON3_INSTALL_DIR} \
+    "${LIB_NAME}==${LIB_VERSION}"
+    pip2.7 install \
+    --upgrade \
+    --force-reinstall \
+    --src ${PYTHON2_SOURCE_DIR} \
+    --target ${PYTHON2_INSTALL_DIR} \
+    "${LIB_NAME}==${LIB_VERSION}"
+}
+
+install_module()
+{
+    cd $SCRIPT_DIR
+    mkdir -p ${MODULE_DIR}
+
+    export LIB_NAME
+    export LIB_VERSION
+    INSTALL_DIR=$PYTHON2_INSTALL_DIR
+    export INSTALL_DIR
+    envtpl  --keep-template -o $PYTHON2_MODULE_PATH module.tmpl
+    INSTALL_DIR=$PYTHON3_INSTALL_DIR
+    export INSTALL_DIR
+    envtpl  --keep-template -o $PYTHON3_MODULE_PATH module.tmpl
+}
+
+if [[ $1 == "module" ]]
+then
+    install_module
+else
+    install_lib
+    install_module
+fi

pyfmi/module.tmpl

+#%Module1.0#####################################################################
+###
+### {{ LIB_NAME }} {{ LIB_VERSION }} module
+###
+proc ModulesHelp { } {
+    global version prefix
+
+    puts stderr "\tlibs/{{ LIB_NAME }}/{{ LIB_VERSION }} - loads {{ LIB_NAME }} {{ LIB_VERSION }} and its environment"
+}
+
+module-whatis   "Loads {{ LIB_NAME }} {{ LIB_VERSION }} and its environment"
+
+# for Tcl script use only
+set version     {{ LIB_VERSION }}
+set prefix      {{ INSTALL_DIR }}
+
+if [module-info mode load]  {
+    prepend-path PYTHONPATH $prefix
+    ## Required to find openmodelica libs
+    prepend-path LD_LIBRARY_PATH /usr/lib/x86_64-linux-gnu/omc/
+}
+
+if [module-info mode remove] {
+    remove-path PYTHONPATH $prefix
+    remove-path LD_LIBRARY_PATH /usr/lib/x86_64-linux-gnu/omc/
+}

sympy/install.sh

@@ -14,11 +14,6 @@ LIB_NAME="sympy"
 LIB_VERSION=1.1.1
 PYTHON_VERSION=3.0.0
 
-# Use cern repository! (patched version)
-LLVM_REPOSITORY=http://root.cern.ch/git/llvm.git
-CLING_REPOSITORY=http://root.cern.ch/git/cling.git
-CLANG_REPOSITORY=http://root.cern.ch/git/clang.git
-
 LIB_VERSION_MAJOR=`echo "${LIB_VERSION}" | sed 's/\([0-9]\)[.][0-9][.][0-9]/\1/g'`
 LIB_VERSION_MINOR=`echo "${LIB_VERSION}" | sed 's/[0-9][.]\([0-9]\)[.][0-9]/\1/g'`
 LIB_VERSION_PATCH=`echo "${LIB_VERSION}" | sed 's/[0-9][.][0-9][.]\([0-9]\)/\1/g'`