add petsc script

#!/bin/bash

set -x 

LIB_NAME="petsc"

LIB_VERSION=3.7.6

GCC_VERSION=6.4.0

MPI_LIB=openmpi

MPI_VERSION=2.1.1 #1.10.7

LIB_FULLNAME=${LIB_NAME}-${LIB_VERSION}

GCC_FULL=gcc-$GCC_VERSION

GCC_SHORT="gcc${GCC_VERSION//.}"

MPI_FULL=${MPI_LIB}-${MPI_VERSION}

MPI_SHORT="${MPI_LIB}${MPI_VERSION//.}"

SUB_DIR=${LIB_NAME}/${LIB_VERSION}/${GCC_FULL}/${MPI_FULL}

WORK_DIR=/data/software/sources/${SUB_DIR}

SRC_DIR=${WORK_DIR}/${LIB_FULLNAME}

ARCHIVE=${SRC_DIR}.tar.gz

URL="http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-lite-${LIB_VERSION}.tar.gz"

BUILD_DIR=${WORK_DIR}/${LIB_FULLNAME}-build

INSTALL_DIR=/data/software/install/${SUB_DIR}

SCRIPT_DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"

MODULE_DIR=/data/software/modules/libs/${LIB_NAME}

MODULE_PATH=${MODULE_DIR}/${LIB_VERSION}_${GCC_SHORT}_${MPI_SHORT}

install_lib()

{

module purge

module load gcc/${GCC_VERSION}

module load ${MPI_LIB}/${MPI_VERSION}_${GCC_SHORT}

module load hdf5/1.10.1_${GCC_SHORT}_${MPI_SHORT}

module list

gcc --version |head -n 1

sleep 2

mpirun --version |head -n 1

sleep 2

if [[ ! -f $ARCHIVE ]]; then

  mkdir -p $WORK_DIR

  wget $URL -O $ARCHIVE

fi

if [[ ! -d $BUILD_DIR ]]; then

  mkdir $BUILD_DIR

  tar zxf $ARCHIVE --directory $BUILD_DIR

fi

cd $BUILD_DIR/petsc-${LIB_VERSION} || exit 1

./configure --with-shared-libraries=1 \

            --prefix=${INSTALL_DIR} \

            --with-cc=`which mpicc` \

            --with-cxx=`which mpic++` \

            --with-fc=`which mpif90` \

            --with-mpiexec=`which mpiexec` \

            --download-suitesparse=1  \

            --download-ml  \

            --download-blacs  \

            --download-scalapack \

            --download-fblaslapack  \

            --download-mumps  \

            --download-hypre  \

            --download-ptscotch \

            --with-hdf5=1 \

            --with-hdf5-dir=$HDF5_ROOT \

            --with-debugging=0 \

            --COPTFLAGS='-O3'  --CXXOPTFLAGS='-O3'  --FOPTFLAGS='-O3' || exit 1

make PETSC_DIR=`pwd` PETSC_ARCH="arch-linux2-c-opt" all || exit 1

make PETSC_DIR=`pwd` PETSC_ARCH="arch-linux2-c-opt" install || exit 1

}

install_module()

{

cd $SCRIPT_DIR

mkdir -p ${MODULE_DIR}

export LIB_NAME

export LIB_VERSION

export INSTALL_DIR

envtpl  --keep-template -o $MODULE_PATH module.tmpl

}

if [[ $1 == "module" ]]

then

  install_module

else

  install_lib

  install_module

fi

#%Module1.0#####################################################################

### 

### {{ LIB_NAME }} {{ LIB_VERSION }}

### 

proc ModulesHelp { } {

    global version prefix

    puts stderr "\tlibs//{{ LIB_NAME }}/{{ LIB_VERSION }} - loads {{ LIB_NAME }} {{ LIB_VERSION }}"

}

module-whatis   "Loads {{ LIB_NAME }} {{ LIB_VERSION }}"

# for Tcl script use only

set prefix      {{ INSTALL_DIR }}

# prepend-path CMAKE_PREFIX_PATH $prefix

prepend-path LD_LIBRARY_PATH $prefix/lib

prepend-path LIBRARY_PATH $prefix/lib

setenv PETSC_DIR $prefix