Add singularity 2.4 module

#!/bin/bash

set -x

################################################################################

# GENERIC: Base directory for source, install, build.

SOURCE_BASE_DIR=/data/software/sources

BUILD_BASE_DIR=/data/software/sources

INSTALL_BASE_DIR=/data/software/install

MODULE_BASE_DIR=/data/software/modules

################################################################################

SCRIPT_DIR="$( cd "$( dirname "${BASH_SOURCE[0]}" )" && pwd )"

LIB_NAME="singularity"

LIB_VERSION=2.4.0

GCC_VERSION=6.4.0

SINGULARITY_REPOSITORY=https://github.com/singularityware/singularity.git

# Use cern repository! (patched version)

LIB_VERSION_MAJOR=`echo "${LIB_VERSION}" | sed 's/\([0-9]\)[.][0-9][.][0-9]/\1/g'`

LIB_VERSION_MINOR=`echo "${LIB_VERSION}" | sed 's/[0-9][.]\([0-9]\)[.][0-9]/\1/g'`

LIB_VERSION_PATCH=`echo "${LIB_VERSION}" | sed 's/[0-9][.][0-9][.]\([0-9]\)/\1/g'`

GCC_VERSION_MAJOR=`echo "${GCC_VERSION}" | sed 's/\([0-9]\)[.][0-9][.][0-9]/\1/g'`

GCC_VERSION_MINOR=`echo "${GCC_VERSION}" | sed 's/[0-9][.]\([0-9]\)[.][0-9]/\1/g'`

GCC_VERSION_PATCH=`echo "${GCC_VERSION}" | sed 's/[0-9][.][0-9][.]\([0-9]\)/\1/g'`

DEPEND_GCC=gcc-${GCC_VERSION_MAJOR}${GCC_VERSION_MINOR}${GCC_VERSION_PATCH}

DEPEND_MODULE_GCC=gcc${GCC_VERSION_MAJOR}${GCC_VERSION_MINOR}${GCC_VERSION_PATCH}

SOURCE_DIR=${SOURCE_BASE_DIR}/${LIB_NAME}/${LIB_VERSION}/${DEPEND_GCC}

BUILD_DIR=${BUILD_BASE_DIR}/${LIB_NAME}/${LIB_VERSION}/${DEPEND_GCC}/build

INSTALL_DIR=${INSTALL_BASE_DIR}/${LIB_NAME}/${LIB_VERSION}/${DEPEND_GCC}

MODULE_DIR=${MODULE_BASE_DIR}/tools/${LIB_NAME}

MODULE_PATH=${MODULE_DIR}/${LIB_VERSION}_${DEPEND_MODULE_GCC}

prepare_lib()

{

    # Prepare directories.

    mkdir -p ${SOURCE_DIR}

    cd ${SOURCE_DIR}

    if [[ ! -d ${SOURCE_DIR}/singularity ]]; then

        echo "-- Cloning repositories in ${SOURCE_DIR}/"

        #--------------------------------------------------

        # Get LLVM

        git clone ${SINGULARITY_REPOSITORY}

    else

        echo "[WARNING] Repo exist ignore clone! (${SOURCE_DIR}/llvm)"

        exit 1

    fi

    cd singularity

}

build_lib() {

    echo "-- Building ${LIB_NAME}-${LIB_VERSION}"

    if [[ ! -d ${BUILD_DIR} ]]; then

        mkdir -p ${BUILD_DIR}

    else

        echo "[WARNING] Build directory exist! Remove it first ! ${BUILD_DIR}"

        exit 1

    fi

    module purge

    module load gcc/${GCC_VERSION}

    module list

    # Check gcc version here

    gcc --version |head -n 1

    sleep 2

    ./autogen.sh

    ./configure --prefix=${INSTALL_DIR}

    make

}

install_lib()

{

    sudo make install

}

install_module()

{

    cd $SCRIPT_DIR

    mkdir -p ${MODULE_DIR}

    export LIB_NAME

    export LIB_VERSION

    export INSTALL_DIR

    envtpl  --keep-template -o $MODULE_PATH module.tmpl

}

if [[ $1 == "module" ]]

then

    install_module

else

    prepare_lib

    build_lib

    install_lib

    install_module

fi

#%Module1.0#####################################################################

###

### {{ LIB_NAME }} {{ LIB_VERSION }} module

###

proc ModulesHelp { } {

    global version prefix

    puts stderr "\ttools/{{ LIB_NAME }}/{{ LIB_VERSION }} - loads {{ LIB_NAME }} {{ LIB_VERSION }} and its environment"

}

module-whatis   "Loads {{ LIB_NAME }} {{ LIB_VERSION }} and its environment"

# for Tcl script use only

set version     {{ LIB_VERSION }}

set prefix      {{ INSTALL_DIR }}

prepend-path CMAKE_PREFIX_PATH $prefix

prepend-path PATH $prefix/bin

prepend-path LD_LIBRARY_PATH $prefix/lib

prepend-path MANPATH $prefix/share/man

unsetenv LANGUAGE

unsetenv LANG

unsetenv LC