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atlas
please-install
Commits
58a8fe5e
Commit
58a8fe5e
authored
Nov 10, 2017
by
Guillaume DOLLÉ
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Add singularity 2.4 module
parent
8f7872d9
Changes
2
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2 changed files
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125 additions
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0 deletions
+125
-0
singularity/install.sh
singularity/install.sh
+101
-0
singularity/module.tmpl
singularity/module.tmpl
+24
-0
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singularity/install.sh
0 → 100755
View file @
58a8fe5e
#!/bin/bash
set
-x
################################################################################
# GENERIC: Base directory for source, install, build.
SOURCE_BASE_DIR
=
/data/software/sources
BUILD_BASE_DIR
=
/data/software/sources
INSTALL_BASE_DIR
=
/data/software/install
MODULE_BASE_DIR
=
/data/software/modules
################################################################################
SCRIPT_DIR
=
"
$(
cd
"
$(
dirname
"
${
BASH_SOURCE
[0]
}
"
)
"
&&
pwd
)
"
LIB_NAME
=
"singularity"
LIB_VERSION
=
2.4.0
GCC_VERSION
=
6.4.0
SINGULARITY_REPOSITORY
=
https://github.com/singularityware/singularity.git
# Use cern repository! (patched version)
LIB_VERSION_MAJOR
=
`
echo
"
${
LIB_VERSION
}
"
|
sed
's/\([0-9]\)[.][0-9][.][0-9]/\1/g'
`
LIB_VERSION_MINOR
=
`
echo
"
${
LIB_VERSION
}
"
|
sed
's/[0-9][.]\([0-9]\)[.][0-9]/\1/g'
`
LIB_VERSION_PATCH
=
`
echo
"
${
LIB_VERSION
}
"
|
sed
's/[0-9][.][0-9][.]\([0-9]\)/\1/g'
`
GCC_VERSION_MAJOR
=
`
echo
"
${
GCC_VERSION
}
"
|
sed
's/\([0-9]\)[.][0-9][.][0-9]/\1/g'
`
GCC_VERSION_MINOR
=
`
echo
"
${
GCC_VERSION
}
"
|
sed
's/[0-9][.]\([0-9]\)[.][0-9]/\1/g'
`
GCC_VERSION_PATCH
=
`
echo
"
${
GCC_VERSION
}
"
|
sed
's/[0-9][.][0-9][.]\([0-9]\)/\1/g'
`
DEPEND_GCC
=
gcc-
${
GCC_VERSION_MAJOR
}${
GCC_VERSION_MINOR
}${
GCC_VERSION_PATCH
}
DEPEND_MODULE_GCC
=
gcc
${
GCC_VERSION_MAJOR
}${
GCC_VERSION_MINOR
}${
GCC_VERSION_PATCH
}
SOURCE_DIR
=
${
SOURCE_BASE_DIR
}
/
${
LIB_NAME
}
/
${
LIB_VERSION
}
/
${
DEPEND_GCC
}
BUILD_DIR
=
${
BUILD_BASE_DIR
}
/
${
LIB_NAME
}
/
${
LIB_VERSION
}
/
${
DEPEND_GCC
}
/build
INSTALL_DIR
=
${
INSTALL_BASE_DIR
}
/
${
LIB_NAME
}
/
${
LIB_VERSION
}
/
${
DEPEND_GCC
}
MODULE_DIR
=
${
MODULE_BASE_DIR
}
/tools/
${
LIB_NAME
}
MODULE_PATH
=
${
MODULE_DIR
}
/
${
LIB_VERSION
}
_
${
DEPEND_MODULE_GCC
}
prepare_lib
()
{
# Prepare directories.
mkdir
-p
${
SOURCE_DIR
}
cd
${
SOURCE_DIR
}
if
[[
!
-d
${
SOURCE_DIR
}
/singularity
]]
;
then
echo
"-- Cloning repositories in
${
SOURCE_DIR
}
/"
#--------------------------------------------------
# Get LLVM
git clone
${
SINGULARITY_REPOSITORY
}
else
echo
"[WARNING] Repo exist ignore clone! (
${
SOURCE_DIR
}
/llvm)"
exit
1
fi
cd
singularity
}
build_lib
()
{
echo
"-- Building
${
LIB_NAME
}
-
${
LIB_VERSION
}
"
if
[[
!
-d
${
BUILD_DIR
}
]]
;
then
mkdir
-p
${
BUILD_DIR
}
else
echo
"[WARNING] Build directory exist! Remove it first !
${
BUILD_DIR
}
"
exit
1
fi
module purge
module load gcc/
${
GCC_VERSION
}
module list
# Check gcc version here
gcc
--version
|head
-n
1
sleep
2
./autogen.sh
./configure
--prefix
=
${
INSTALL_DIR
}
make
}
install_lib
()
{
sudo
make
install
}
install_module
()
{
cd
$SCRIPT_DIR
mkdir
-p
${
MODULE_DIR
}
export
LIB_NAME
export
LIB_VERSION
export
INSTALL_DIR
envtpl
--keep-template
-o
$MODULE_PATH
module.tmpl
}
if
[[
$1
==
"module"
]]
then
install_module
else
prepare_lib
build_lib
install_lib
install_module
fi
singularity/module.tmpl
0 → 100644
View file @
58a8fe5e
#%Module1.0#####################################################################
###
### {{ LIB_NAME }} {{ LIB_VERSION }} module
###
proc ModulesHelp { } {
global version prefix
puts stderr "\ttools/{{ LIB_NAME }}/{{ LIB_VERSION }} - loads {{ LIB_NAME }} {{ LIB_VERSION }} and its environment"
}
module-whatis "Loads {{ LIB_NAME }} {{ LIB_VERSION }} and its environment"
# for Tcl script use only
set version {{ LIB_VERSION }}
set prefix {{ INSTALL_DIR }}
prepend-path CMAKE_PREFIX_PATH $prefix
prepend-path PATH $prefix/bin
prepend-path LD_LIBRARY_PATH $prefix/lib
prepend-path MANPATH $prefix/share/man
unsetenv LANGUAGE
unsetenv LANG
unsetenv LC
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